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Fig. 7 | BMC Genomics

Fig. 7

From: Global transcriptional analysis suggests Lasiodiplodia theobromae pathogenicity factors involved in modulation of grapevine defensive response

Fig. 7

L. theobromae gene expression during grapevine infection. Fungal gene expression was evaluated at 7, 11 and 15 days post-infection in unstressed or heat-stressed grapevine (HS). Normalization was done using β-tubulin and the relative gene expression is indicated as logFC (in planta/in vitro) using HTqPCR package in R. One asterisk indicates significant differences with general linear model statistics (p-values < 0.05) for in planta/in vitro and quotation marks for heat-stressed/non stressed contrasting conditions. The dendrogram indicates the relationship between gene expression profiles through calculates of Canberra distances and Pearson correlation. The color key indicates logFC values ranging from golden for up-regulated genes, to cyan for down-regulated genes. IRCD: intradiol-ring cleavage dioxygenase (comp4276_c0_seq1); SH: salicylate hydroxylase (comp12473_c0_seq1); FMH: fumarylacetoacetate hydrolase (comp14342_c0_seq1); SIT:sugar inositol transporter (comp8181_c0_seq1), MCO: multicopper oxidase (comp7300_c0_seq1), PL: pectate lyase (comp16237_c0_seq1), AML: amylase (comp7101_c0_seq1), HGD: homogentisate dioxygenase (comp8784_c0_seq1), CHD: choline dehydrogenase (comp5526_c0_seq1), GH3: glycoside hydrolase family 3 (comp13725_c0_seq1), XGH: xylosidase glycoside hydrolase (comp5761_c0_seq2), HPPD: 4- Hydroxyphenylpyruvate dioxygenase (comp18638_c0_seq1)

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