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Table 1 Main characteristics of Trinity de novo transcriptome assembly

From: Global transcriptional analysis suggests Lasiodiplodia theobromae pathogenicity factors involved in modulation of grapevine defensive response

Parameters All transcript Only longest Isoform
Number of contigs 29621 19860
Contig N10 6773 5525
Contig N20 5345 4321
Contig N30 4365 3572
Contig N40 3667 2971
Contig N50 3135 2472
Median contig length 1242 658
Average contig 1798.4 1310.58
Total assembled bases 53270493 27680863