Table 3 The proportion of genes that were shared between the DESeq2 and edgeR analyses (Table 2) within GO biological processes
From: Sea lampreys elicit strong transcriptomic responses in the lake trout liver during parasitism
| Biological process | Leans up | Leans down | Siscowets up | Siscowets down |
|---|---|---|---|---|
| Cellular component organization or biogenesis (GO:0071840) | 6.10 % | 1.30 % | 4.60 % | 2.00 % |
| Cellular process (GO:0009987) | 17.60 % | 16.90 % | 18.40 % | 18.20 % |
| Localization (GO:0051179) | 9.20 % | 8.10 % | 10.70 % | 9.30 % |
| Apoptotic process (GO:0006915) | 3.10 % | 3.80 % | 1.50 % | 2.00 % |
| Reproduction (GO:0000003) | 1.50 % | 1.90 % | 2.10 % | 1.10 % |
| Biological regulation (GO:0065007) | 9.20 % | 8.10 % | 10.10 % | 9.50 % |
| Response to stimulus (GO:0050896) | 6.90 % | 10.00 % | 6.30 % | 8.60 % |
| Developmental process (GO:0032502) | 6.10 % | 7.50 % | 6.90 % | 5.60 % |
| Multicellular organismal process (GO:0032501) | 3.10 % | 4.40 % | 5.40 % | 4.10 % |
| Metabolic process (GO:0008152) | 31.30 % | 29.40 % | 28.50 % | 32.70 % |
| Immune system process (GO:0002376) | 6.10 % | 6.30 % | 4.00 % | 4.30 % |
| Locomotion (GO:0040011) | 0 % | 0.60 % | 0.20 % | 0.40 % |
| Biological adhesion (GO:0022610) | 0 % | 1.90 % | 1.30 % | 2.20 % |