Sample | C_1 | C_2 | C_3 | T_1 | T_2 | T_3 |
---|---|---|---|---|---|---|
Group | Control | Control | Control | Treatment | Treatment | Treatment |
Raw reads | 73,139,016 | 73,988,890 | 70,579,138 | 74,086,562 | 82,677,190 | 100,025,614 |
Clean reads | 69,375,390 | 70,089,536 | 66,879,214 | 70,162,270 | 78,368,448 | 94,553,606 |
Valid ratio (%) | 94.81Â % | 94.68Â % | 94.71Â % | 94.66Â % | 94.75Â % | 94.49Â % |
Q30 (%) | 94.90Â % | 94.75Â % | 94.79Â % | 95.04Â % | 95.11Â % | 94.92Â % |
GC content (%) | 51.50Â % | 51.50Â % | 51.50Â % | 51.50Â % | 51.50Â % | 51.50Â % |
Total mapped reads | 49,236,780 | 49,313,882 | 47,427,718 | 50,794,372 | 57,048,473 | 69,576,797 |
Uniquely mapped reads | 45,869,880 | 45,818,693 | 44,268,019 | 47,090,588 | 52,708,435 | 64,514,418 |
Multiple mapped reads | 3,366,900 | 3,495,189 | 3,159,699 | 3,703,784 | 4,340,038 | 5,062,379 |
Mapping rate (%) | 70.97Â % | 70.36Â % | 70.92Â % | 72.40Â % | 72.80Â % | 73.58Â % |