Table 2 LincRNA transcripts highly coexpressed with defence-related CDS genes

LincRNA739

Intergenic

1

PGSC0003DMG400014801

AT4G17760

rad1-like

response to stimulus (GO:0050896)

response to stress (GO:0006950)

LincRNA1304

Intergenic

1

PGSC0003DMG400020345

AT2G38080

Laccase-4

response to stimulus (GO:0050896)

response to toxic substance (GO:0009636)

LincRNA127

Intergenic

1

PGSC0003DMG400011631

AT3G46230

17.4 kDa class I heat shock protein (HSP17.4A)

response to stimulus (GO:0050896)

response to stress (GO:0006950)

LincRNA803

Intergenic

1

AT1G53540

17.6 kDa class I heat shock protein 3 (HSP17.6C)

response to stimulus (GO:0050896)

response to stress (GO:0006950)

LincRNA127

Intergenic

1

PGSC0003DMG400000996

AT3G47570

Probable LRR receptor-like serine/threonine-protein kinase

response to stimulus (GO:0050896)

defence response to bacterium (GO:0042742)

AT3G47580

Leucine-rich repeat protein kinase family protein

AT3G47090

Leucine-rich repeat protein kinase-like protein

LincRNA1464

Intergenic

1

PGSC0003DMG400012994

AT5G21950

Hydrolase, alpha/beta fold family protein

response to stimulus (GO:0050896)

response to toxic substance (GO:0009636)

AT4G33180

LincRNA907

Intergenic

1

PGSC0003DMG400000757

AT2G23620

Methylesterase 1

response to stimulus (GO:0050896)

response to toxic substance (GO:0009636)

LincRNA1118

Intergenic

0.9

LincRNA258

Intergenic

0.9

LincRNA632

Intergenic

1

PGSC0003DMG400025635

AT3G45920

Protein kinase family protein

defence response to bacterium (GO:0042742)

PGSC0003DMG400004885

AT2G24370

Adenine nucleotide alpha hydrolase domain-containing protein kinase

defence response to bacterium (GO:0042742)

LincRNA758

Intergenic

1

LincRNA749

Intergenic

1

AT4G09570

Calcium-dependent protein kinase 4

response to endogenous stimulus (GO:0009719)

PGSC0003DMG400026077

AT1G35670

Calcium-dependent protein kinase 11

LincRNA758

Intergenic

1

LincRNA749

Intergenic

1

PGSC0003DMG400013679

AT1G30270

CBL-interacting serine/threonine-protein kinase 23

response to stimulus (GO:0050896)

LincRNA1112

Intergenic

1

LincRNA908

Intergenic

0.9

LincRNA1712

Intergenic

0.9

PGSC0003DMG400030755

AT1G77110

Probable auxin efflux carrier component 6

response to stimulus (GO:0050896)

response to endogenous stimulus (GO:0009719)

LincRNA178

Intergenic

0.9

LincRNA1583

Intergenic

1

PGSC0003DMG400021008

AT4G20940

Probable LRR receptor-like serine/threonine-protein kinase

response to stimulus (GO:0050896)

defense response to bacterium (GO:0042742)

LincRNA379

Intergenic

0.9