Construction of high-resolution genetic maps of Zoysia matrella (L.) Merrill and applications to comparative genomic analysis and QTL mapping of resistance to fall armyworm

Table 1 Summary of SNP marker filtering procedure

Filtering Step	Number of SNPs Remaining
Raw RADSeq processing	11,359
Number of single-dose alleles	8,485
Type of single-dose alleles	Diamond	Cavalier
Number of single-dose alleles before filtering	3,323	5,162
After removal of identical markers	3,311	5,136
After removal of markers with more than 10 % missing data	2,858	4,307
After removal of significantly segregation distorted markers (P < 0.05)	2,462	3,793

ISSN: 1471-2164