Skip to main content

Table 1 Number of variants across the TASR and AR gene groups per each impact class

From: Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes

  High impact Moderate impact Low impact   
Gene Splice Stop gained Stop lost Start loss Frame shift Mdel Mtol/SIFT unknown Silent Start gained % strong impact Total
Total TASRs 1 3 1 0 5 34 92 80 1 20.3 % 217
 TAS1R1 (umami) 1 1 1 0 3 4 9 12 0 32.2 % 31
 TAS1R3 (sweet and umami) 0 1 0 0 0 1 0 11 1 14.3 % 14
 TAS2Rs (bitter) 0 1 0 0 2 29 83 57 0 18.5 % 172
AR 37 16 0 4 17 277 615 1,559 24 14.5 % 2,549
Total segregating 38 19 1 4 22 311 707 1,639 25   2,766
Alternative allele fixed 4 0 0 0 4 0 9 9 1   27
Total 42 19 1 4 26 311 716 1,648 26   2,793
  1. Splice: variants predicted to alter either donor or acceptor splice sites; % strong impact: percentage of H + Mdel variants