Skip to main content

Table 1 Sequences analyzed in the present study for gonochoric species with DUI and hermaphroditic species with SMI

From: In silico analyses of mitochondrial ORFans in freshwater mussels (Bivalvia: Unionoida) provide a framework for future studies of their origin and function

Species mtDNA type Accession number ORF names
Subfamiliy Ambleminae
Quadrula quadrula M FJ809751.1 Qqu-Morf
M FJ809751.1 Qqu-Mcox1
M FJ809751.1 Qqu-Matp8
F FJ809750.1 Qqu-Forf
F FJ809750.1 Qqu-Fcox1
F FJ809750.1 Qqu-Fatp8
Toxolasma lividus F HM849457.1 Tli-Forf
Toxolasma parvum H KU728097 Tpa-Horf
Venustaconcha ellipsiformis M FJ809752.1 Vel-Morf
M FJ809752.1 Vel-Mcox1
M FJ809752.1 Vel-Matp8
F FJ809753.1 Vel-Forf
F FJ809753.1 Vel-Fcox1
F FJ809753.1 Vel-Fatp8
Subfamiliy Anodontinae
Anodonta anatina M KF030962.1 Aan-Morf
F KF030964.1 Aan-Forf
Subfamiliy Gonideinae
Inversidens japanensis M AB055624.1 Ija-Morf
M AB055624.1 Ija-Mcox1
M AB055624.1 Ija-Matp8
F AB055625.1 Ija-Forf
F AB055625.1 Ija-Fcox1
F AB055625.1 Ija-Fatp8
Solenaia carinatus M KC848655.1 Sca-Morf
M KC848655.1 Sca-Mcox1
M KC848655.1 Sca-Matp8
F KC848654.1 Sca-Forf
F KC848654.1 Sca-Fcox1
F KC848654.1 Sca-Fatp8
Subfamiliy Hyriidae
Hyridella menziesii M KU728093 Hme-Morf
M KU728094 Hme-Mcox1
F KU728092 Hme-Forf
F AY785394.1 Hme-Fcox1
Subfamiliy Margaritiferinae
Cumberlandia monodonta M KU728095 Cmo-Morf
M KU728096 Cmo-Mcox1
F HM849375.1 Cmo-Forf
F KF647374.1 Cmo-Fcox1
Margaritifera falcata H HM849545.1 Mfa-Horf (top- bottom 1–4)
H HM856634.1
H HM849547.1
H HM849548.1
H HM856634.1 Mfa-Hcox1 (top-bottom 1–2)
H NC_015476.1
Margaritifera margaritifera F HM849399.1 Mma-Forf
F HM849095.1 Mma-Fcox1
Subfamiliy Unioninae
Lasmigona complanata F HM849393.1 Lco-Forf
Lasmigona compressa H HM849534.1 Lco-Horf (top-bottom 1–2)
H HM849535.1
H HM856638.1 Lco-Hcox1 (top-bottom 1–2)
H NC_015481.1
Lasmigona subviridis H HM849542.1 Lsu-Horf (top-bottom 1–2)
H HM849543.1
Pyganodon grandis M FJ809755.1 Pgr-Morf
M FJ809755.1 Pgr-Mcox1
M FJ809755.1 Pgr-Matp8
F FJ809754.1 Pgr-Forf
F FJ809754.1 Pgr-Fcox1
F FJ809754.1 Pgr-Fatp8
Utterbackia imbecillis H HM849591.1 Uim-Horf (top-bottom 1–7)
H HM849595.1
H HM849594.1
H HM849601.1
H HM849606.1
H HM849597.1
H HM849584.1
H NC_015479 Uim-Hcox1 (top-bottom 1–2)
H HM856637.1
Utterbackia peninsularis M HM856635.1 Upe-Morf
M HM856635.1 Upe-Mcox1
M HM856635.1 Upe-Matp8
F HM856636.1 Upe-Forf
F HM856636.1 Upe-Fcox1
F HM856636.1 Upe-Fatp8
  1. Note: M M mtDNA in a DUI gonochoric breeding system, F F mtDNA in a DUI gonochoric breeding system, H H mtDNA in a non-DUI hermaphroditic breeding system