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Table 1 Murine RT-PCR primers used for AS event validation in this study

From: The transcriptional and splicing landscape of intestinal organoids undergoing nutrient starvation or endoplasmic reticulum stress

Gene Name

Primer Sequences (5’- 3)’

Hnrnpd

FW: GAAAGTATCCAGGCGAGGTG

RV: GCTATTAGCAGGTGGCAGGA

Hnrpdl

FW: CAGACTACAGCGGTCAGCAG

RV: TGGACCAATACCCCCTACAA

Srsf7

FW: CGCCTTGATTCAGAATGTCA

RV: TGATCTTGACCTCCGTCCTC

Ogt (partial intron 4 retention)

FW: ACTGTGTTCGCAGTGACCTG

RV: CAAATCTCCCCTTGTGCATT

Ogt (full intron 4 retention)

FW: CTTGGTAGCAGCAGGTGACA

RV: AATGCTCACGGTCTTGCTTT

Slc35b1

FW: AAGGACCCAAACAGGAGACA

RV: ATGGCACCCACATAGGAGAC

Ufd1l

FW: TGTTCATTTTATTTCAAAAATCGGAGC

RV: AAGAACTCATCATAGTGCTCCTGC

Ivnsabp1

FW: AGCATCTGGGAGAATGGAGA

RV: CATCATCACTGCCAAACACC

Casp4

FW: TGCTGAACGCAGTGACAAGC

RV: TAAGAGCCTTTCGTGTACGGC

Nnt

FW: AACAGTGCAAGGAGGTGGAC

RV: GTGCCAAGGTAAGCCACAAT

Nt5c3

FW: GCTGGCCCAGTACATATTCA

RV: GGGCATCTTTTCCCATTGTA

Frrs1

FW: TTGCATTTCTCACGACCAG

RV: TAGCCTCAGGAAGGGTGATG