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Fig. 10 | BMC Genomics

Fig. 10

From: Deep landscape update of dispersed and tandem repeats in the genome model of the red jungle fowl, Gallus gallus, using a series of de novo investigating tools

Fig. 10

Density of TE hot spots in galGal4 chromosomes. Histograms of TE hot spot density calculated for all galGal4 chromosomes, except chromosome 32 (too small; 1028 bp). Hot spot are defined (p > 99 %) using permutation assays with a All TE models, b Kronos, c putative_LTR_group4, d retroCalimero, e Charli and f mariner1_GG. The number of copies for each dataset are indicated in parenthesis. Results for all other TE models are shown in Additional files 16 and 17

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BMC Genomics

ISSN: 1471-2164

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