Fig. 4

Coverage of TEs and DM annotations in galGal4 chromosomes. a Percentage coverage of each chromosome by repeats resulting from the REPET annotation (STEP3, Fig. 2). b Percentage coverage of each chromosome by TE segments resulting from the DM annotation (STEP4, Fig. 2). In a and b blue bars indicate the coverage of non-LTR retrotransposons (CR1), red bars LTR-retrotransposons and solo LTRs, yellow bars DNA transposons, green bars repeats of undetermined origin, and kakhi bars indicate z-reps (a repeat unique for chromosome Z). In b chromosome 32 was removed because there was no annotation. c Percentage coverage of each chromosome or the complete galGal4 model by the RM annotation (blue bars), the REPET annotation (STEP4, Fig. 2; red bars) and the sum of TE and DM annotations (STEP3 and 4, Fig. 2; green bars)