Fig. 2

Differentially-regulated genes identified through domain analysis with homology to secondary metabolite genes. For each of the 802 differentially expressed genes identified from RNA-Seq, a blastp search was done, and conserved protein domains were identified. The figure shows genes with homology to genes commonly involved in secondary metabolism [36]. Green bars = genes more highly expressed in infected leaf tissue relative to mycelium grown in medium; Blue bars = genes with lower expression in infected leaf tissue