Characterizing the population structure and genetic diversity of maize breeding germplasm in Southwest China using genome-wide SNP markers

Table 3 Ten SNPs with the highest allele frequency variation between the Tropical and Temperate groups

SNP name	Chr^a	Position	Allele	Allele frequency		Allele frequency variation
SNP name	Chr^a	Position	Allele	Tem^b	Tro^c	Allele frequency variation
PZE-103086995	3	144096829	A	0.888	0.118	0.770
SYN23575	2	49925995	G	0.855	0.094	0.761
PZE-103087179	3	144683803	A	0.066	0.795	0.729
PZE-103087189	3	144684150	C	0.066	0.795	0.729
SYN14294	2	152502748	A	0.178	0.906	0.728
PZE-103087178	3	144683738	C	0.908	0.181	0.727
SYN20183	3	144689036	G	0.914	0.197	0.717
PZE-103087199	3	144687159	C	0.066	0.780	0.714
SYN20185	3	144689964	G	0.066	0.780	0.714
SYN20186	3	144687048	C	0.066	0.780	0.714

ISSN: 1471-2164