Table 4 Differentially over-expressed transcripts and their identification as determined through BLASTx against the NCBI non-redundant database
From: Comparative transcriptomics of anal fin pigmentation patterns in cichlid fishes
| Â | Gene | Transcript | logFC | BLASTx Identification | Accession | e-value |
|---|---|---|---|---|---|---|
1 | asip1 | comp13033_c0 | 3.143700418 | agouti-signaling protein-like [Oreochromis niloticus] | XP_003448419.1 | 3.00E-25 |
2 | rbp7 | comp8091_c0 | 3.229469794 | retinoid-binding protein 7-like [Oreochromis niloticus] | XP_003448369.1 | 9.00E-91 |
3 | hand2 | comp22787_c0 | 3.511901296 | heart- and neural crest derivatives-expressed protein 2-like [Oreochromis niloticus] | XP_003452793.1 | 2.00E-96 |
4 | NA | comp17910_c0 | 2.484101474 | No significant similarity found | NA | NA |
5 | NA | comp20229_c0 | 2.626648739 | hypothetical protein LOC100708826 [Oreochromis niloticus] | XP_003455230.1 | 6.00E-19 |
6 | IF ON3 | comp1238_c0 | 2.271395094 | intermediate filament protein ON3-like [Oreochromis niloticus] | XP_003441441.1 | 0 |
7 | NA | comp23328_c0 | 2.751465615 | No significant similarity found | NA | NA |
8 | akap12 | comp28860_c0 | 2.392200617 | A-kinase anchor protein 12 [Danio rerio] > gb|ABQ11279.1| gravin [Danio rerio] | NP_001091654.1 | 2.00E-49 |
9 | bmp3b | comp14170_c0 | 1.907176985 | bone morphogenetic protein 3B-like [Oreochromis niloticus] | XP_003438593.1 | 0 |
10 | NA | comp23699_c0 | 2.056104188 | No significant similarity found | NA | NA |
11 | rbp4a | comp104_c0 | 1.758056096 | retinol-binding protein 4-A-like [Oreochromis niloticus] | XP_003441907.1 | 2.00E-132 |
12 | hoxC12a | comp21426_c0 | 2.020913618 | Hoxc12a [Haplochromis burtoni] | ABS70754.1 | 2.00E-172 |
13 | cytl1 | comp7733_c0 | 1.730109411 | cytokine-like protein 1-like [Oreochromis niloticus] | XP_003441598.1 | 4.00E-80 |
14 | NA | comp24816_c0 | 1.803818569 | No significant similarity found | NA | NA |
15 | sfr5 | comp6979_c0 | 1.70609137 | secreted frizzled-related protein 5-like isoform 3 [Oreochromis niloticus] | XP_003451970.1 | 0 |
16 | NA | comp4443_c1 | 1.661176264 | No significant similarity found | NA | NA |
17 | fhl2a | comp2939_c0 | 1.543403442 | four and a half LIM domains protein 2-like [Oreochromis niloticus] | XP_003453001.1 | 0 |
18 | cecr5 | comp6479_c0 | 1.505843782 | cat eye syndrome critical region protein 5-like [Oreochromis niloticus] | XP_003457763.1 | 0 |
19 | zygin1 | comp2115_c0 | 1.527432266 | fasciculation and elongation protein zeta-1-like [Oreochromis niloticus] | XP_003449843.1 | 0 |
20 | vtn | comp7947_c0 | 1.490014821 | vitronectin-like [Oreochromis niloticus] | XP_003458657.1 | 0.00E + 00 |
21 | igf1 | comp17864_c0 | 1.458424511 | insulin-like growth factor 1 [Oreochromis niloticus] | XP_003448107.1 | 7.00E-94 |
22 | igSF10 | comp36206_c0 | 1.484184706 | immunoglobulin superfamily member 10-like [Oreochromis niloticus] | XP_003454869.1 | 0 |
23 | fmdo | comp19154_c0 | 1.343960756 | fibromodulin-like [Oreochromis niloticus] | XP_003441412.1 | 0 |