Table 5 Summary of initial pre-processing and generation of the high-quality molluscan protein gene sets
From: Comparative transcriptomics enlarges the toolkit of known developmental genes in mollusks
Organism | No. of raw readsa | No. of reconstructed transcripts | No. of n-rb putative proteins | Gene set completeness (%) |
|---|---|---|---|---|
Gymnomenia pellucida (Neomeniomorpha) | 53,751,440 | 228,678 | 54,997 | 94.31 |
Wirenia argentea (Neomeniomorpha) | 50,456,889 | 394,251 | 54,183 | 81.14 |
Scutopus ventrolineatus (Chaetodermomorpha) | 43,492,046 | 220,258 | 39,631 | 79.83 |
Acanthochitona crinita (Polyplacophora) | 35,737,364 | 364,800 | 59,271 | 94.42 |
Idiosepius notoides (Cephalopoda) | 38,267,214 | 285,863 | 21,533c | 92.76c |
Idiosepius notoides (454) (Cephalopoda) | 588,878 | 43,218 | – | – |
Lottia cf. kogamogai (Gastropoda) | 402,814 | 34,794 | 16,781 | 68.21 |
Nucula tumidula (Bivalvia) | 40,797,848 | 273,272 | 38,563 | 95.02 |
Antalis entalis (Scaphopoda) | 24,194,021 | 351,943 | 35,443 | 94.54 |