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Table 4 List of transcript tags from the sainfoin library that were identified as involved in nodulation by rhizobia

From: De-novo transcriptome assembly for gene identification, analysis, annotation, and molecular marker discovery in Onobrychis viciifolia

Transcript_ID Annotation Average expression Expression range
comp91212_c0_seq1 Nodulation protein h-like 5.1 3.2–7.0
comp1255675_c0_seq1 Nodulation-signalling pathway 2 (NSP2) 0.3 0–0.5
comp101951_c0_seq2 Nodulation-signalling pathway 2 (NSP2) 4.28 1.1–8.2
comp97736_c0_seq1 Chitin elicitor receptor kinase 1-like isoform x1 (NFR1) 17.6 14.9–22.7
comp1757272_c0_seq1 Nodulation-signalling pathway 2 (NSP2) 0.4 0–2.0
comp50519_c0_seq2 Nodulation-signalling pathway 2 (NSP2) 0.4 0.3–1.0
comp99240_c2_seq1 Nodulation receptor kinase 7.1 5.3–9.5
comp100615_c0_seq2 Nodulation-signalling pathway 1 (NSP1) 3.0 1.2–4.7
comp82109_c0_seq2 Nodulation-signalling pathway 2 (NSP2) 0.6 0.3–1.0
comp97623_c0_seq1 Nodulation receptor kinase-like (SYMRK) 43.3 31.7–60.3
comp101444_c0_seq10 Nodulation protein h 5.7 3.7–7.2
comp95861_c0_seq1 Protein lyk5-like (NFR1) 3.2 0.7–6.7
comp2759407_c0_seq1 Nodulation-signalling pathway 2 (NSP2) 0.3 0–0.8
comp96879_c1_seq7 Chitin elicitor receptor kinase 1-like (NFR1) 2.4 0.6–4.2
comp98436_c0_seq3 DMI1 13.8 10.8–18.4
comp91752_c0_seq3 DMI1 18.6 13.9–25.3
comp71670_c0_seq1 NIN 0.6 0.2–1.3
  1. The expression levels indicate the average and range between the five accessions that were used
  2. NFR1 nod factor receptor, SYMRK symbiotic receptor kinase, DMI1 does not make infections 1, NIN nodule inception