From: AP-SKAT: highly-efficient genome-wide rare variant association test
SKAT | SKAT-O | AP-SKAT | |||||||
---|---|---|---|---|---|---|---|---|---|
 | 10−2 | 10−3 | 10−4 | 10−2 | 10−3 | 10−4 | 10−2 | 10−3 | 10−4 |
250 | 2.19E-1 | 8.09E-2 | 2.90E-2 | 2.21E-1 | 8.30E-2 | 2.95E-2 | 2.24E-1 | 8.32E-2 | 2.97E-2 |
500 | 4.84E-1 | 3.05E-1 | 1.63E-1 | 4.80E-1 | 3.04E-1 | 1.64E-1 | 4.85E-1 | 3.01E-1 | 1.67E-1 |
750 | 5.99E-1 | 4.83E-1 | 3.69E-1 | 5.99E-1 | 4.82E-1 | 3.71E-1 | 6.09E-1 | 4.80E-1 | 3.66E-1 |
1000 | 7.42E-1 | 5.42E-1 | 4.88E-1 | 7.41E-1 | 5.42E-1 | 4.89E-1 | 7.48E-1 | 5.46E-1 | 4.87E-1 |
1250 | 8.50E-1 | 6.52E-1 | 5.14E-1 | 8.50E-1 | 6.54E-1 | 5.13E-1 | 8.50E-1 | 6.54E-1 | 5.16E-1 |
1500 | 9.19E-1 | 7.50E-1 | 5.93E-1 | 9.20E-1 | 7.48E-1 | 5.90E-1 | 9.18E-1 | 7.48E-1 | 5.94E-1 |