Fig. 3
From: HIPPI: highly accurate protein family classification with ensembles of HMMs
Precision-recall curves for the five methods, evaluated on one cross-fold subset of the data. We vary the length of the query sequence from unchanged (i.e., full) to half-length and quarter-length. The curves are estimated by varying an inclusion threshold parameter for the particular method and producing five to seven distinct points, with intermediate values interpolated linearly. Note that the scales for both axes vary between panels due to the significant impact of sequence fragmentation