From: HIPPI: highly accurate protein family classification with ensembles of HMMs
Method | Fragment Size | |||||
---|---|---|---|---|---|---|
Quarter-length | Half-length | Full-length | ||||
Prec. | Rec. | Prec. | Rec. | Prec. | Rec. | |
HIPPI-c (5 %, 0 %) | 92.6 % | 33.8 % | 86.4 % | 47.7 % | 85.6 % | 79.2 % |
HIPPI-c (10 %, 0 %) | 93.1 % | 34.3 % | 86.6 % | 45.1 % | 85.1 % | 78.0 % |
HIPPI-c (10 %, 40 %) | 92.2 % | 33.4 % | 86.6 % | 48.8 % | 85.8 % | 79.5 % |
HIPPI-a (5 %, 0 %) | 82.6 % | 39.9 % | 78.6 % | 67.4 % | 84.1 % | 83.3 % |
HIPPI-a (10 %, 0 %) | 82.8 % | 37.8 % | 78.1 % | 65.2 % | 83.6 % | 82.7 % |
HIPPI-a (10 %, 40 %) | 82.5 % | 40.6 % | 79.3 % | 68.8 % | 84.6 % | 83.8 % |