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Table 2 Basepair cost matrix

From: Reconstruction of ancestral RNA sequences under multiple structural constraints

 

A

C

G

U

A

0.003

0.003

0.003

0.001

C

0.003

0.003

0

0.003

G

0.003

0

0.003

0.002

U

0.001

0.003

0.002

0.003

  1. Each cell C i,j represents the cost of having the basepair i-j