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Table 2 Basepair cost matrix

From: Reconstruction of ancestral RNA sequences under multiple structural constraints

  A C G U
A 0.003 0.003 0.003 0.001
C 0.003 0.003 0 0.003
G 0.003 0 0.003 0.002
U 0.001 0.003 0.002 0.003
  1. Each cell C i,j represents the cost of having the basepair i-j