Reduced representation bisulphite sequencing of ten bovine somatic tissues reveals DNA methylation patterns and their impacts on gene expression

Table 1 Sequencing and mapping summary

Tissue ID	Tissue name	Clean reads	Unique mapped reads	Unique mapping rate (%)	CG methylation (%)	Non-CG methylation (%)	Bisulfite conversion rate (%)
BGA13	Skeletal muscle near ceasarian	62,431,346	27,615,411	44.23	33.87	1.45	99.38
BGA14	Whole testes^a	65,883,038	23,323,753	35.40	37.00	0.94	99.45
BGA19	Mammary/parenchyma^a	61,978,584	27,862,415	44.95	30.50	1.31	99.28
BGA22	Uterus intercaruncular^a	62,431,548	26,830,069	42.98	33.22	1.45	99.41
BGA47	Frontal cortex^a	63,601,202	22,808,676	35.86	30.89	1.48	99.30
BGA60	Abomasum^a	62,173,874	28,496,274	45.83	38.06	1.04	99.25
BGA62	Ileum^a	65,228,026	23,666,863	36.28	33.54	1.50	99.04
BGA81	Rumen^a	62,646,332	25,923,247	41.38	29.87	1.44	99.28
BGA135	Nucleated blood cells^a	63,611,924	23,184,841	36.45	36.03	1.54	99.07
BGA173	D 90 lactating mammary gland	62,474,748	28,581,463	45.75	32.04	1.36	99.33

ISSN: 1471-2164