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Table 4 Completeness of the V. jacobsoni transcriptome based on 248 CEGs

From: Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)

  # Protsa % Completenessb # Totalc Averaged % Orthoe
Completef 246 99.19 807 3.28 89.84
 Group 1 66 100.00 230 3.48 90.91
 Group 2 56 100.00 196 3.5 91.07
 Group 3 60 98.36 182 3.03 85.00
 Group 4 64 98.46 199 3.11 92.19
Partialg 248 100.00 967 3.9 98.39
 Group 1 66 100.00 271 4.11 96.97
 Group 2 56 100.00 229 4.09 100.00
 Group 3 61 100.00 221 3.62 98.36
 Group 4 65 100.00 246 3.78 98.46
  1. These results are based on the set of genes selected by Genis Parra
  2. aProts = number of 248 ultra-conserved CEGs present in genome, b%Completeness = percentage of 248 ultra-conserved CEGs present, cTotal = total number of CEGs present including putative orthologs, dAverage = average number of orthologs per CEG, e%Ortho = percentage of detected CEGS that have more than 1 ortholog, fComplete = refers to those predicted proteins in the set of 248 CEGs that when aligned to the HMM for the KOG for that protein-family, give an alignment length that is 70% of the protein length, gPartial = If a protein is not complete, but if it still exceeds a pre-computed minimum alignment score