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Table 5 Most specific GO terms related to mite genes that are down-regulated in the A. mellifera host, cluster 1

From: Differential gene expression in Varroa jacobsoni mites following a host shift to European honey bees (Apis mellifera)

GO-ID Term Category P-Value Am-down seq. counta Ref seq. countb
GO:0060237 regulation of fungal-type cell wall organization P 0.000611 1 1
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding F 0.000102 2 56
GO:0000987 core promoter proximal region sequence-specific DNA binding F 0.000181 2 75
GO:0001159 core promoter proximal region DNA binding F 0.000195 2 78
GO:0048546 digestive tract morphogenesis P 0.000440 2 118
GO:0003705 RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity F 0.000549 2 132
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding F 0.000697 2 149
GO:0001012 RNA polymerase II regulatory region DNA binding F 0.000782 2 158
GO:0048565 digestive tract development P 0.001380 2 211
GO:0055123 digestive system development P 0.001610 2 228
  1. Fisher’s exact test showing enriched GO terms in mite genes that are down-regulated in A. mellifera host (cluster 1). For a complete list and gene ID see (Additional file 5: Table S5). a23 genes in test set bnumber of times the GO was identified in reference set of 37,661 genes