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Table 2 Analysis of differentially expressed proteins associated with transcriptome

From: Comparative proteomics reveals that central metabolism changes are associated with resistance against Sporisorium scitamineum in sugarcane

Protein ID Annotation YT/YCK RT/RCK
Proteins (fold change) Transcripts (log2 fold change) FDR Proteins (fold change) Transcripts (log2 fold change) FDR
Sugarcane_Unigene_BMK.34407 Beta-1,3-glucanase 1.309 2.257 8.280E-09 - - -
Sugarcane_Unigene_BMK.59640 Peroxidase 16 1.641 1.457 2.940E-07 - - -
gi34949353 Peroxidase 4 1.587 1.683 2.210E-06 - - -
Sugarcane_Unigene_BMK.55512 Endo-1,4-beta-xylanase 1.991 1.918 1.110E-16 - - -
Sugarcane_Unigene_BMK.51436 Pathogenesis-related protein 1 1.777 1.032 4.411E-04 1.762 1.395 2.830E-08
gi36048114 Pathogenesis-related protein 1 1.290 1.552 1.420E-07 - - -
Sugarcane_Unigene_BMK.42413 Heat shock protein 1.287 2.000 6.440E-14 - - -
Sugarcane_Unigene_BMK.62025 Alcohol dehydrogenase 1 1.321 1.172 1.430E-05 - - -
gi6274485 pyruvate orthophosphate dikinase 1.776 1.286 3.690E-07 - - -
gi35938626 Expansin-B3 1.291 1.030 7.564E-04 1.256 1.132 4.420E-05
gi35030831 Beta-expansin 5 1.361 1.247 9.890E-07 - - -
Sugarcane_Unigene_BMK.53837 Pheophorbide a oxygenase 1.537 1.098 1.276E-04 - - -
Sugarcane_Unigene_BMK.57765 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 1.552 1.109 5.880E-05 - - -
gi35014290 1-aminocyclopropane-1-carboxylate oxidase 1 1.407 2.754 0.0000 - - -
gi35045219 Barwin-like Protein 4.460 1.041 7.963E-04 - - -
Sugarcane_Unigene_BMK.43180 Apyrase 3 1.248 1.441 5.560E-08 - - -
Sugarcane_Unigene_BMK.51142 5-pentadecatrienyl resorcinol O-methyltransferase 2.604 2.652 0.0000 - - -
Sugarcane_Unigene_BMK.61555 Fructose-bisphosphate aldolase 1.544 1.179 1.800E-05 - - -
Sugarcane_Unigene_BMK.66631 Primary amine oxidase 1.243 −1.208 4.28E-06 - - -
Sugarcane_Unigene_BMK.36357 Glycine-rich RNA-binding protein 1.413 −1.279 2.07E-06 - - -
Sugarcane_Unigene_BMK.66398 Protein kinase 0.722 1.283 3.35E-07 - - -
Sugarcane_Unigene_BMK.70494 Triacylglycerol lipase 0.825 1.073 0.000192327 - - -
Sugarcane_Unigene_BMK.49659 Extracellular ribonuclease 0.648 1.312 4.41E-07 - - -
Sugarcane_Unigene_BMK.58110 Peroxidase 2 0.734 1.239 0.000814239 - - -
gi35015228 Plasma membrane intrinsic protein 0.771 1.006 0.000781839 - - -
Sugarcane_Unigene_BMK.74968 Cellulose synthase A catalytic subunit 5 0.773 1.536 2.61E-10 - - -
gi35089478 Microtubule-associated protein futsch-like 0.818 1.173 0.000224862 - - -
Sugarcane_Unigene_BMK.50541 Peroxidase - - - 1.328 1.549 2.500E-05
Sugarcane_Unigene_BMK.42924 Heat shock protein - - - 2.078 1.167 4.520E-05
Sugarcane_Unigene_BMK.84564 Lectin - - - 1.326 1.944 7.080E-05
Sugarcane_Unigene_BMK.48205 Glycine-rich cell wall structural protein - - - 1.353 1.265 9.570E-07
Sugarcane_Unigene_BMK.44684 40S ribosomal protein S9-2 - - - 1.270 1.564 4.430E-11
Sugarcane_Unigene_BMK.57737 Lichenase - - - 0.712 1.393 1.98E-08
Sugarcane_Unigene_BMK.73761 Acid beta-fructofuranosidase - - - 0.801 1.713 1.07E-05
gi34936008 Translation elongation factor P - - - 1.494 −1.093 0.000427098
  1. Notes: Differentially expressed proteins: fold change > 1.20 (upregulated) or < 0.83 (downregulated), and P-value < 0.05; Differentially expressed transcripts: log2 fold change ≥ 1 (upregulated) or < −1 (downregulated), and FDR ≤ 0.01. YCK and YT: Yacheng05-179 under sterile water and Sporisorium scitamineum stresses after 48 h, respectively; RCK and RT: ROC22 under sterile water and S. scitamineum stresses after 48 h, respectively