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Table 2 Analysis of differentially expressed proteins associated with transcriptome

From: Comparative proteomics reveals that central metabolism changes are associated with resistance against Sporisorium scitamineum in sugarcane

Protein ID

Annotation

YT/YCK

RT/RCK

Proteins (fold change)

Transcripts (log2 fold change)

FDR

Proteins (fold change)

Transcripts (log2 fold change)

FDR

Sugarcane_Unigene_BMK.34407

Beta-1,3-glucanase

1.309

2.257

8.280E-09

-

-

-

Sugarcane_Unigene_BMK.59640

Peroxidase 16

1.641

1.457

2.940E-07

-

-

-

gi34949353

Peroxidase 4

1.587

1.683

2.210E-06

-

-

-

Sugarcane_Unigene_BMK.55512

Endo-1,4-beta-xylanase

1.991

1.918

1.110E-16

-

-

-

Sugarcane_Unigene_BMK.51436

Pathogenesis-related protein 1

1.777

1.032

4.411E-04

1.762

1.395

2.830E-08

gi36048114

Pathogenesis-related protein 1

1.290

1.552

1.420E-07

-

-

-

Sugarcane_Unigene_BMK.42413

Heat shock protein

1.287

2.000

6.440E-14

-

-

-

Sugarcane_Unigene_BMK.62025

Alcohol dehydrogenase 1

1.321

1.172

1.430E-05

-

-

-

gi6274485

pyruvate orthophosphate dikinase

1.776

1.286

3.690E-07

-

-

-

gi35938626

Expansin-B3

1.291

1.030

7.564E-04

1.256

1.132

4.420E-05

gi35030831

Beta-expansin 5

1.361

1.247

9.890E-07

-

-

-

Sugarcane_Unigene_BMK.53837

Pheophorbide a oxygenase

1.537

1.098

1.276E-04

-

-

-

Sugarcane_Unigene_BMK.57765

NADP-dependent glyceraldehyde-3-phosphate dehydrogenase

1.552

1.109

5.880E-05

-

-

-

gi35014290

1-aminocyclopropane-1-carboxylate oxidase 1

1.407

2.754

0.0000

-

-

-

gi35045219

Barwin-like Protein

4.460

1.041

7.963E-04

-

-

-

Sugarcane_Unigene_BMK.43180

Apyrase 3

1.248

1.441

5.560E-08

-

-

-

Sugarcane_Unigene_BMK.51142

5-pentadecatrienyl resorcinol O-methyltransferase

2.604

2.652

0.0000

-

-

-

Sugarcane_Unigene_BMK.61555

Fructose-bisphosphate aldolase

1.544

1.179

1.800E-05

-

-

-

Sugarcane_Unigene_BMK.66631

Primary amine oxidase

1.243

−1.208

4.28E-06

-

-

-

Sugarcane_Unigene_BMK.36357

Glycine-rich RNA-binding protein

1.413

−1.279

2.07E-06

-

-

-

Sugarcane_Unigene_BMK.66398

Protein kinase

0.722

1.283

3.35E-07

-

-

-

Sugarcane_Unigene_BMK.70494

Triacylglycerol lipase

0.825

1.073

0.000192327

-

-

-

Sugarcane_Unigene_BMK.49659

Extracellular ribonuclease

0.648

1.312

4.41E-07

-

-

-

Sugarcane_Unigene_BMK.58110

Peroxidase 2

0.734

1.239

0.000814239

-

-

-

gi35015228

Plasma membrane intrinsic protein

0.771

1.006

0.000781839

-

-

-

Sugarcane_Unigene_BMK.74968

Cellulose synthase A catalytic subunit 5

0.773

1.536

2.61E-10

-

-

-

gi35089478

Microtubule-associated protein futsch-like

0.818

1.173

0.000224862

-

-

-

Sugarcane_Unigene_BMK.50541

Peroxidase

-

-

-

1.328

1.549

2.500E-05

Sugarcane_Unigene_BMK.42924

Heat shock protein

-

-

-

2.078

1.167

4.520E-05

Sugarcane_Unigene_BMK.84564

Lectin

-

-

-

1.326

1.944

7.080E-05

Sugarcane_Unigene_BMK.48205

Glycine-rich cell wall structural protein

-

-

-

1.353

1.265

9.570E-07

Sugarcane_Unigene_BMK.44684

40S ribosomal protein S9-2

-

-

-

1.270

1.564

4.430E-11

Sugarcane_Unigene_BMK.57737

Lichenase

-

-

-

0.712

1.393

1.98E-08

Sugarcane_Unigene_BMK.73761

Acid beta-fructofuranosidase

-

-

-

0.801

1.713

1.07E-05

gi34936008

Translation elongation factor P

-

-

-

1.494

−1.093

0.000427098

  1. Notes: Differentially expressed proteins: fold change > 1.20 (upregulated) or < 0.83 (downregulated), and P-value < 0.05; Differentially expressed transcripts: log2 fold change ≥ 1 (upregulated) or < −1 (downregulated), and FDR ≤ 0.01. YCK and YT: Yacheng05-179 under sterile water and Sporisorium scitamineum stresses after 48 h, respectively; RCK and RT: ROC22 under sterile water and S. scitamineum stresses after 48 h, respectively
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BMC Genomics

ISSN: 1471-2164

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