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Table 1 Overview of transcriptome sequencing and de novo assemble results

From: De novo transcriptome sequencing of black pepper (Piper nigrum L.) and an analysis of genes involved in phenylpropanoid metabolism in response to Phytophthora capsici

  P. nigrum-1 P. nigrum-2 P. nigrum-3 P. flaviflorum-1 P. flaviflorum-2 P. flaviflorum-3
Raw reads (Mb) 49.26 54.44 54.44 49.26 54.44 54.44
Q20 percentage 99.33 98.24 98.30 99.33 98.23 98.17
Clean reads (Mb) 48.51 49.27 49.66 48.49 49.54 49.46
unigenes 62,206 55,880 54,681 61,187 64,183 65,096
Percent GC 45.23 45.57 45.48 45.27 45.03 45.58
Contig N50 1,131 1,065 1,069 1,301 1,091 1,026