Gene expression profile indicates involvement of NO in Camellia sinensis pollen tube growth at low temperature

BMC Genomics

Table 2 Summary of the assembly quality of the transcriptomes of the pollen tubes

	Sample	Total number	Total length(nt)	Mean length(nt)	N50	Total consensus sequences	Distinct clusters	Distinct singletons
Contig	CsPT-CK-1	60,611	20,192,162	333	571
	CsPT-CK-2	61,246	20,491,956	335	581
	CsPT-CK-3	63,117	20,892,307	331	561
	CsPT-LT-1	56,102	19,226,389	343	599
	CsPT-LT-2	58,622	19,960,405	340	595
	CsPT-LT-3	60,547	20,132,613	333	572
	CsPT-NO-1	59,750	19,797,938	331	559
	CsPT-NO-2	58,884	19,734,167	335	575
	CsPT-NO-3	59,550	19,805,943	333	568
Unigene	CsPT-CK-1	39,726	25,741,808	648	1165	39,726	14,095	25,631
	CsPT-CK-2	40,440	26,270,780	650	1152	40,440	14,717	25,723
	CsPT-CK-3	41,626	27,483,327	660	1204	41,626	15,310	26,316
	CsPT-LT-1	36,993	24,057,930	650	1182	36,993	13,290	23,703
	CsPT-LT-2	39,070	25,937,230	664	1203	39,070	14,224	24,846
	CsPT-LT-3	39,439	25,906,326	657	1191	39,439	14,301	25,138
	CsPT-NO-1	39,514	25,545,806	647	1173	39,514	14,211	25,303
	CsPT-NO-2	38,298	24,889,732	650	1169	38,298	13,676	24,622
	CsPT-NO-3	39,061	24,971,317	639	1153	39,061	13,923	25,138
	All	45,432	46,435,079	1022	1574	45,432	22,812	22,620

Total Consensus Sequences represents all of the assembled unigenes. Distinct Clusters represents the clustered unigenes, with the same cluster containing high-similarity (more than 70 %) unigenes that may be from the same gene or homologous genes. Distinct Singletons represents unigenes from a single gene

ISSN: 1471-2164