Table 1 Transposable elements in the barley mitochondrial genome
From: Mitochondrial genome sequences from wild and cultivated barley (Hordeum vulgare)
Poaceae a | Oryza a | Panicoideae a | Triticum a | |||||
|---|---|---|---|---|---|---|---|---|
Repeat class | No. of fragments | Length | No. of fragments | Length | No. of fragments | Length | No. of fragments | Length |
DNA transposon | 13 | 837 | 9 | 522 | 8 | 406 | - | - |
EnSpm | 1 | 58 | 1 | 97 | 2 | 93 | - | - |
Harbinger | 1 | 38 | 1 | 38 | - | - | - | - |
Helitron | 5 | 428 | 2 | 157 | - | - | - | - |
MuDR | 5 | 277 | - | - | 5 | 277 | - | - |
hAT | - | - | 4 | 194 | - | - | - | - |
Other | 1 | 36 | 1 | 36 | 1 | 36 | - | - |
LTR retrotransposon | 57 | 10,210 | 41 | 572 | 49 | 8591 | 16 | 2043 |
Copia | 19 | 3574 | 10 | 1947 | 14 | 2306 | 7 | 890 |
Gypsy | 38 | 6636 | 31 | 6139 | 35 | 6285 | 9 | 1153 |
Non-LTR | 18 | 4155 | 9 | 978 | 16 | 3685 | 2 | 103 |
L1 | 17 | 3911 | 6 | 572 | 16 | 3685 | 1 | 41 |
Other | 1 | 244 | 3 | 406 | - | - | 1 | 62 |
Total | 88 | 15,202 | 59 | 9586 | 73 | 12,682 | 18 | 2146 |