Table 6 P-values of 22 SNPs in seven genes for testing path coefficients
From: A new statistical framework for genetic pleiotropic analysis of high dimensional phenotype data
Phenotype | Â | P-value testing path coef | |||
|---|---|---|---|---|---|
| Â | Gene | Chr | SNP position | Gene | SNP |
FASTGLUCOSE | SEMA3B | 3 | 50310922 | 5.98E-06 | 6.41E-05 |
FASTGLUCOSE | DNAJC16 | 1 | 15873386 | 1.09E-05 | 5.62E-03 |
FASTGLUCOSE | DNAJC16 | 1 | 15874961 | Â | 3.61E-03 |
FASTGLUCOSE | DNAJC16 | 1 | 15905501 | Â | 3.94E-02 |
DBP | OBSCN | 1 | 228404668 | 1.48E-05 | 8.81E-02 |
DBP | OBSCN | 1 | 228461187 | Â | 9.96E-02 |
DBP | OBSCN | 1 | 228482028 | Â | 9.68E-02 |
DBP | OBSCN | 1 | 228496066 | Â | 8.61E-02 |
DBP | OBSCN | 1 | 228503711 | Â | 6.52E-04 |
DBP | OBSCN | 1 | 228565208 | Â | 2.66E-03 |
DBP | OBSCN | 1 | 228565445 | Â | 8.28E-02 |
HDL | SOX13 | 1 | 204085609 | 4.31E-05 | 2.45E-02 |
HDL | SOX13 | 1 | 204092129 | Â | 9.14E-04 |
HDL | SOX13 | 1 | 204094963 | Â | 9.40E-02 |
HDL | SOX13 | 1 | 204095220 | Â | 3.56E-02 |
HDL | SOX13 | 1 | 204095280 | Â | 3.79E-02 |
HDL | SRRM5 | 19 | 44099538 | 4.74E-05 | 6.37E-02 |
HDL | SRRM5 | 19 | 44111890 | Â | 2.21E-05 |
FIBRINOGEN | SLC45A4 | 8 | 142225990 | 1.63E-04 | 3.97E-02 |
FIBRINOGEN | SLC45A4 | 8 | 142226108 | Â | 1.61E-02 |
FIBRINOGEN | SLC45A4 | 8 | 142228909 | Â | 8.87E-04 |
FIBRINOGEN | LHFPL2 | 5 | 77784738 | 5.95E-06 | 4.21E-06 |