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Table 1 A summary of comparative mapping of foxtail millet SiPPR genes on Brachypodium sylvaticum, sorghum, maize and rice

From: Genome-wide investigation and expression analyses of the pentatricopeptide repeat protein gene family in foxtail millet

Setaria italica

Brachypodium distachyon

Oryza sativa

Sorghum bicolor

Zea mays

Chr1

Chr3(77.96 %)

Chr2(77.96 %)

Chr4(74.58 %)

Chr4(16.94 %),Chr5(52.54 %)

Chr2

Chr1(61.40 %),Chr4(24.56 %)

Chr7(57.89 %),Chr9(21.05 %)

Chr2(84.21 %)

Chr2(28.07 %),Chr7(49.12 %)

Chr3

Chr2(52.08 %),Chr4(25 %)

Chr5(47.91 %),Chr12(20.83 %)

Chr9(41.67 %)

Chr6(33.33 %)

Chr4

Chr1(76.19 %)

Chr6(59.52 %)

Chr10(71.42 %)

Chr6(26.19 %),Chr9(30.95 %)

Chr5

Chr2(78.2)

Chr1(73.07 %)

Chr3(70.51 %)

Chr3(39.74 %),Chr8(30.76 %)

Chr6

Chr3(85.18 %)

Chr8(74.07 %)

Chr7(70.37 %)

Chr1(25.92 %),Chr4(25.92 %)

Chr7

Chr5(47.82 %)

Chr4(50 %)

Chr6(50 %)

Chr2(36.95 %)

Chr8

Chr4(57.69)

Chr11(42.30 %)

Chr5(61.53 %)

Chr4(34.61 %)

Chr9

Chr9(60 %),Chr3(26 %)

Chr3(53 %),Chr10(24 %)

Chr1(73 %)

Chr1(55.01 %)

  1. The percentages indicated among parentheses indicate the fraction of loci with conserved synthenic relationships
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BMC Genomics

ISSN: 1471-2164

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