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Table 1 Number of differentially expressed genes, used for DIA and IPA analysis, for each considered comparison after applying a P value cutoff of ≤ 0.01 and a fold change threshold at ≤/≥ ± 1.5

From: Prepartum body condition score and plane of nutrition affect the hepatic transcriptome during the transition period in grazing dairy cows

Comparison

Wka

Up

Down

Total

DIA

 B4F125 vs B4F75

−7

62

63

125

7

336

229

565

28

147

234

381

 B5F125 vs B5F75

−7

31

43

74

7

99

106

205

28

15

16

31

IPA

 B4F125 vs B4F75

n.a.

69

174

243

 B5F125 vs B5F75

n.a.

56

62

118

  1. aTime factor was used only for DIA analysis, while IPA analysis focused on the overall effect during the whole transition period