Transcriptome analysis of the fungal pathogen Fusarium oxysporum f. sp. medicaginis during colonisation of resistant and susceptible Medicago truncatula hosts identifies differential pathogenicity profiles and novel candidate effectors

Table 2 Differentially expressed Fusarium genes detected during infection of A17 or DZA315 roots

Proportion of gene model coverage	A17 2 dpi vs IV		A17 7 dpi vs IV		DZA315 2 dpi vs IV		DZA315 7 dpi vs IV
	up	down	up	down	up	down	up	down
≥25 %	107	90	128	88	117	108	446	333
≥50 %	64	21	63	34	66	35	281	141
≥95 %	13	1	25	5	17	4	105	28

IV in vitro. Note, DEGs in ≥ 95 % are also captured within the ≥ 50 % and ≥ 25 % datasets. Likewise, DEGs in ≥ 50 % are captured within the ≥ 25 % dataset

ISSN: 1471-2164