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Table 2 Gene counts and presence/absence of other innate immune genes

From: Insights into the innate immunome of actiniarians using a comparative genomic approach

Species CniFL MASP SRCR C-type Lectin domains C3 family Factor B (Bf) family C6 family Factor I (If) family
A. tenebrosa (1) 5* 1 114 83 + + - -
A. tenebrosa (2) 7 1 131 89 + + - -
A. tenebrosa (3) 2 1 121 76 + + - -
A. tenebrosa (4) 2 1 105 70 + + - -
A. pallida 4 1 51 87 + + - -
A. buddemeieri 2* 1 135 88 + + - -
A. elegantissima 0 1 60 57 + + - -
A. veratra 5 1 129 111 + + - -
C. polypus (1) 6 1 61 65 + + - -
C. polypus (2) 5 1 74 84 + + - -
N. annamensis 3 1 39 57 + + - -
N. vectensis 1 1 39 67 + + - -
Telmatactis sp. 2 1 59 41 + + - -
  1. Gene counts shown are non-conservative, i.e., they refer to the number of contigs identified by Trinity as different genes, and may include contigs with partial ORFs. Only complete ORFs used in subsequent analysis for CniFL genes. *PCR validated. + present; - absent. Abbreviations are as follows: CniFL, Cnidarian Ficolin-like protein; SRCR, Scavenger-Receptor Cysteine Rich; MASP, Mannan-binding lectin (or mannose-associated) Serine Protease 1