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Table 2 Gene counts and presence/absence of other innate immune genes

From: Insights into the innate immunome of actiniarians using a comparative genomic approach

Species

CniFL

MASP

SRCR

C-type Lectin domains

C3 family

Factor B (Bf) family

C6 family

Factor I (If) family

A. tenebrosa (1)

5*

1

114

83

+

+

-

-

A. tenebrosa (2)

7

1

131

89

+

+

-

-

A. tenebrosa (3)

2

1

121

76

+

+

-

-

A. tenebrosa (4)

2

1

105

70

+

+

-

-

A. pallida

4

1

51

87

+

+

-

-

A. buddemeieri

2*

1

135

88

+

+

-

-

A. elegantissima

0

1

60

57

+

+

-

-

A. veratra

5

1

129

111

+

+

-

-

C. polypus (1)

6

1

61

65

+

+

-

-

C. polypus (2)

5

1

74

84

+

+

-

-

N. annamensis

3

1

39

57

+

+

-

-

N. vectensis

1

1

39

67

+

+

-

-

Telmatactis sp.

2

1

59

41

+

+

-

-

  1. Gene counts shown are non-conservative, i.e., they refer to the number of contigs identified by Trinity as different genes, and may include contigs with partial ORFs. Only complete ORFs used in subsequent analysis for CniFL genes. *PCR validated. + present; - absent. Abbreviations are as follows: CniFL, Cnidarian Ficolin-like protein; SRCR, Scavenger-Receptor Cysteine Rich; MASP, Mannan-binding lectin (or mannose-associated) Serine Protease 1