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Table 1 Overview of detected TSSs

From: TSS-EMOTE, a refined protocol for a more complete and less biased global mapping of transcription start sites in bacterial pathogens

 

S. aureus

A. baumannii

S. epidermidis

E. aerogenes

Growth medium (all at 37 °C)

RPMI

LB

MH

LB

GC content

33 %

39 %

32 %

55 %

Genome size (bp)

2820462

4001457

2564615

5280350

Number of annotated ORFs

2818

3903

2558

5022

Number of detected TSSs

2821

1540

2207

763

Number of TSS clusters

2018

1130

1713

576

Median rTSS-ORF distance (bp)

94

81

98

133