| C. borealis | H. americanus | ||
Raw reads | 414,978,768 | 452,237,240 | ||
Clean reads | 391,060,790 | 426,712,238 | ||
% Q Scores ≥ 30 | 92.96 | 92.72 | ||
% GC | 43.4 | 39.4 | ||
Average clean read length (bp) | 97.05 | 97.16 | ||
Assemblers | CLC Genomics | SeqMan NGen | CLC Genomics | SeqMan NGen |
Number of Contigs | 42,766 | 67,380 | 60,273 | 45,043 |
N50 (bp) | 2,178 | 1,239 | 2,357 | 2,258 |
N75 (bp) | 1,058 | 763 | 1,169 | 1,085 |
Mean contig length (bp) | 1,544 | 1,076 | 1,657 | 1,799 |
Longest contig (bp) | 21,761 | 14,125 | 25,723 | 17,700 |
Shortest contig (bp) | 454 | 451 | 453 | 450 |
Total assembled bases | 66,058,464 | 72,508,321 | 99,847,148 | 81,065,797 |