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Table 2 Classification of regulation type between growth conditions for all genes

From: Genome-wide gene expression and RNA half-life measurements allow predictions of regulation and metabolic behavior in Methanosarcina acetivorans

 

Transcriptionally controlled

Shared control

Degradationally controlled

 

ρ D ≤0

0 <ρ D <1

ρ D ≥1

Comparison

Number (%a)

Number (%)

Number (%)

MeOH vs. TMA

2987 (67.2)

718 (16.1)

742 (16.7)

MeOH vs. Ace

2219 (61.2)

562 (15.5)

847 (23.3)

TMA vs. Ace

1763 (48.5)

844 (23.3)

1026 (28.2)

  1. aPercentage of total genes for which half-lives and RNA reads were of sufficient quality to apply the control analysis (i.e. CV τ <0.5)