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Fig. 4 | BMC Genomics

Fig. 4

From: Arabidopsis thaliana population analysis reveals high plasticity of the genomic region spanning MSH2, AT3G18530 and AT3G18535 genes and provides evidence for NAHR-driven recurrent CNV events occurring in this location

Fig. 4

Concordance of MLPA-based and ddPCR-based gene copy number genotyping results in 92 accessions. On x-asis, ddPCR-based absolute gene copy numbers are shown. On y-axis, normalized MLPA signals are shown, generated with the MLPA probe located nearest to the ddPCR primers’ target position (Additional file 1: Figure S2). The data points (accessions) are colored according to the CNV patterns described in Fig. 2 and accessions with the highest levels of duplication are given unique symbols. Weaker data correlation observed for MSH2 in comparison with AT3G18530 and AT3G18535 is caused by the low number of accessions (12 out of 92 presented) with MSH2 gene copy number other than 2

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BMC Genomics

ISSN: 1471-2164

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