Gene expression profile of intramuscular muscle in Nellore cattle with extreme values of fatty acid

BMC Genomics

Table 2 Average number of pair-end reads, number of mapped reads and concordant pair alignment rate (%) for HIGH and LOW^a groups for each beef fatty acid

Fatty acid	HIGH group^a			LOW group^b
Fatty acid	Input reads	Mapped reads	Concordant pair alignment rate (%)	Input reads	Mapped reads	Concordant pair alignment rate (%)
SFA	20071041	14437527	72.4	19638545	14820629	74.5
MUFA	20240465	14684305	72.8	16939278	12297985	72.4
PUFA	17185305	12864023	73.6	20237062	14549977	72.4
PUFA/SFA	16414850	12317003	73.7	20237100	14568890	72.5
n3	17139100	12827764	73.6	20222528	14551467	72.4
n6	17185305	12864023	73.6	20847167	15061920	72.7
n6/n3	16210236	11638824	72.4	16917230	12764008	74.1
C14:0	18018166	12949199	72.4	17468012	13076106	73.6
C16:0	19244978	13835678	72.3	17828062	13334095	73.6
C18:0	18384047	13412632	73.1	17381770	13032452	73.9
C18:1 cis-9	19653791	14182228	72.4	15553754	11278425	72.4
C18:2 cis-9 trans-11	20179794	15010030	74.1	18123403	13240952	73.1
C18:2 cis-9 cis −12	17185305	12864023	73.6	20847167	15061920	72.7
C18:3 n3	18224781	13583864	73.4	19220721	13826217	72.4

^aHIGH group: Ten highest extreme phenotypes; ^bLOW group: Ten lowest extreme phenotypes

ISSN: 1471-2164