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Fig. 2 | BMC Genomics

Fig. 2

From: MicroRNAs regulate gene plasticity during cold shock in zebrafish larvae

Fig. 2

Analysis of cold shock - affected miRNAs by small RNA-seq in zebrafish larvae. a A pipeline is presented for small RNA identification at each filtration step (left). The number of reads and percentage passed each filtration step of each treatment are shown on the right chart. b Scatter plots show comparisons of RPKM between treatments. Log plots are shown in (c) for those cold-affected genes with a change in expression ≥2 folds. The vertical line in each graph indicates where log2 (RPKM) equal to 1.07. Only dots with values greater than 1.07 were subjected to further analyses. d The numbers of cold shock-affected (≥1.5 folds changes) miRNA are presented in Venn diagram as shown in Fig. 1e. e Heat maps profiles for change in expression of selected miRNAs

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