Skip to main content
Fig. 1 | BMC Genomics

Fig. 1

From: Diversity and distribution of alpha satellite DNA in the genome of an Old World monkey: Cercopithecus solatus

Fig. 1

Characterization of alpha satellite DNA diversity in the monomer dataset. a PCA projection on principal components 1 and 2 of the normalized 5-mer frequency vectors for all sequences. Each point represents a sequence and has been colored according to its assignment to the C1 (purple) or C2 (pastel green) alpha satellite family based on hierarchical classification method. b Phylogenetic tree (Neighbor-joining method, K2P model) for 500 randomly selected sequences. The color code matches the one described for (a) and (b). Bootstrap values for the branches leading to C1 and C2 are not indicated as they remain below 50%

Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us