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Table 4 Comparisons of tools that utilized Connectivity Map concept

From: DeSigN: connecting gene expression with therapeutics for drug repurposing and development

Tools Relationship feature Reference database
DeSigN Global baseline DEGs to drug response GDSC
NFFinder Transcriptomic data to drugs, diseases and experts GEO, CMap and DrugMatrix
DMAP Protein/gene to drug response STITCH and HAPPI
FMCM Pre- and post-treatment gene expression to drug response CMap