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Table 1 Flagellin glycosylation island metrics

From: Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus

Strain

Isolation source

Geographic location

Genbank Acc. # of containing contig

FGI Type

Genome average

Island G + C%

G + C% deviation

Size (kb)

# CDS

G. thermodenitrificans DSM465T

Sugar beet juice

Austria

AYKT01000009

-

49.05%

45.08%

−3.97%

0.9

0

G. thermodenitrificans G11MC16

Grass compost

USA

ABVH01000005

-

48.80%

45.77%

−3.03%

1

0

G. thermodenitrificans NG80-2

Formation water of oil well

China

CP000557

-

49.01%

46.30%

−2.71%

1.3

0

Geobacillus sp. C56-T3

Hot Spring

Nevada, USA

CP002050

-

52.49%

43.24%

−9.25%

1.6

1

G. caldoxylosilyticus CIC9

Hot Spring

Indonesia

AMRO01000028/052

-

44.17%

39.14%

−5.03%

2

2

Geobacillus sp. NUB3621

Soil

China

AOTZ01000009

-

44.38%

42.37%

−2.01%

2

1

Geobacillus sp. JF8

Bark compost

Okayama, Japan

CP006254

-

52.87%

46.52%

−6.35%

2.1

1

Geobacillus sp. FW23

Formation water of oil well

Gujrat, India

JGCJ01000045/075

-

52.24%

49.36%

−2.88%

3.1

2

G. thermoleovorans B23

Production water, subterranean oil reservoir

Niigata, Japan

BATY01000075

-

52.29%

49.36%

−2.93%

3.1

2

G. kaustophilus Blys

Hot Spring

Japan

BASG01000016

-

52.05%

49.35%

−2.70%

3.1

2

G. thermoleovorans CCB_US3_UF5

Hot Spring

Perak, Malaysia

CP003125

-

52.28%

49.36%

−2.92%

3.1

2

Geobacillus sp. CAMR5420

CAMR thermophile culture collection

University of Bath, UK

JHUS01000064

-

51.89%

39.70%

−12.19%

4.5

5

Geobacillus sp. A8

Deep mine water

Limpopo, South Africa

AUXP01000036

-

52.41%

46.24%

−6.17%

5.1

3

G. stearothermophilus ATCC7953

Underprocessed canned food

USA

JALS01000021/022

-

52.39%

41.28%

−11.11%

5.3

4

G. toebii WCH70

Compost

USA

CP001638

-

42.84%

40.76%

−2.08%

5.6

6

G. caldoxylosilyticus DSM 12041T

Soil

Australia

BAWO01000015/16/56

-

43.92%

40.33%

−3.59%

5.9

5

G. stearothermophilus 22

Hot Spring

Garga, Russian Federation

JQCS01000048/070/194

-

52.62%

45.46%

−7.16%

6.9

6

G. stearothermophilus 53

Hot Spring

Garga, Russian Federation

JPYV01000016/113/157

-

52.56%

45.46%

−7.10%

6.9

6

G. kaustophilus DSM 7263T

Pasteurized milk

USA

BBJV01000001/072

I

51.99%

36.60%

−15.39%

14.5

13

G. thermoglucosidans C56-YS93

Hot Spring

Obsidian, USA

CP002835

I

43.95%

34.60%

−9.35%

15.7

15

G. kaustophilus HTA426

Deep sea sediment

Mariana Trench

BA000043

I

52.09%

38.35%

−13.74%

16.5

14

G. thermoglucosidans TNO09.20

Dairy factory biofilm

Netherlands

CM001483

II

43.82%

35.00%

−8.82%

20.6

18

G. thermoglucosidans Y4.1MC1

Hot Spring

Yellowstone National Park, USA

CP002293

II

44.02%

34.83%

−9.19%

20.3

17

G. thermoglucosidans DSM 2542T

Soil

Kyoto, Japan

BAWP01000013

II

43.69%

36.16%

−7.53%

19.2

17

Geobacillus sp. PSS2

Dead, steaming tree

Kilauea Volcano, Hawaii

JQMN01000001

III

51.58%

36.93%

−14.65%

27

21

Geobacillus sp. C56-T2

Hot Spring

Nevada, USA

GC56T2_Contig257 a

III

52.39%

38.95%

−13.44%

30.4

23

Geobacillus sp. Y412MC52

Hot Spring

Yellowstone National Park, USA

CP002442

IV

52.43%

44.58%

−7.85%

20.1

20

Geobacillus sp. Y412MC61

Hot Spring

Yellowstone National Park, USA

CP001794

IV

52.42%

44.58%

−7.84%

20.1

20

G. thermocatenulatus GS-1

Oil well

China

JFHZ01000063

IV

52.11%

45.20%

−6.91%

20.5

19

Geobacillus sp. CAMR12739

CAMR thermophile culture collection

University of Bath, UK

JHUR01000060

IV

52.21%

44.67%

−7.54%

21.2

22

Geobacillus sp. MAS1

Hot Spring

Pakistan

AYSF01000034

IV

52.21%

43.73%

−8.48%

21.5

20

Geobacillus sp. 10

Hot Spring

Yellowstone National Park, USA

CP008934

IV

52.71%

43.29%

−9.42%

22

20

Geobacillus sp. Et7-4

Geyser

El Tatio, Chile

JYBP01000003

IV

51.69%

41.96%

−9.73%

18.8

16

Geobacillus sp. GHH01

Botanical garden soil

Hamburg, Germany

CP004008

IV

52.28%

43.46%

−8.82%

18.9

18

Geobacillus sp. WSUCF1

Compost

Washington, USA

ATCO01000109/170/215

V

52.21%

39.44%

−12.77%

15.8

13

Geobacillus sp. PSS1

Dead, steaming tree

Kilauea Volcano, Hawaii

JPOI01000001

V

52.40%

38.13%

−14.27%

13.4

11

  1. The sizes of the genomics islands for the FGI− and FGI+ strains are indicated, as are the number of proteins (CDS) encoded in each and the difference in G + C content (%) from the genomic average. adenotes the contig as per the Integrated Microbial Genome Database project (IMG ID 250801004) from which the data was obtained. The environmental source and geographical location from which each of the strains was isolated are indicated