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Fig. 5 | BMC Genomics

Fig. 5

From: SNooPer: a machine learning-based method for somatic variant identification from low-pass next-generation sequencing

Fig. 5

Precision – Recall curves for method comparison. Data used to construct these curves were obtained from SNooPer’s calling phase using Model 1A (dark cyan), Model 1B (blue), Model 1C (light blue), Varscan2 (black), JointSNVMix (dark grey) and MuTect (light grey) on the test set. The test set was built using a subset of Dataset 1 that was kept completely separate during the training phase. AUCs are shown for each model

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