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Table 5 Top 20 most differentially expressed genes in the upper jaw skin

From: Transcriptome analysis reveals the genetic basis underlying the seasonal development of keratinized nuptial spines in Leptobrachium boringii

Gene_Id

Symbol

FDR

log2FC

Expression

Gene Description

comp80990_c0

GAA

7.69E-21

−4.1233

Down

Lysosomal alpha-glucosidase-like

comp65666_c0

GAA

4.74E-20

−4.1481

Down

Lysosomal alpha-glucosidase-like

comp41689_c0

GAA

4.87E-18

−4.5083

Down

Lysosomal alpha-glucosidase-like

comp42769_c0

N/A

8.91E-16

−5.0603

Down

Hypothetical protein LOC100026915

comp78052_c0

COL28A1

4.91E-15

−3.6949

Down

Collagen alpha-1(XXVIII) chain

comp83419_c0

SERPINB4

1.54E-12

−3.196

Down

Serpin peptidase inhibitor, clade B (ovalbumin), member 4

comp95579_c0

OGN

2.13E-12

−3.0357

Down

Mimecan-like

comp82704_c0

N/A

7.28E-12

−4.6938

Down

UDP-GlcNAc: beta Gal beta-1,3-acetylglucosaminyl transferase 6 isoform 1

comp94451_c0

N/A

3.84E-11

−3.916

Down

Hypothetical protein LOC100493539

comp93492_c0

nsCCN

9.4E-11

−3.3559

Down

Newt-specific cysteine-rich growth regulator

comp87325_c0

N/A

3.55E-31

5.7757

Up

WAP four-disulfide core domain protein 3-like

comp70946_c0

CSTB

7.89E-23

4.2488

UP

Cystatin B (stefin B)

comp28513_c0

KRT42

1.93E-11

7.2399

Up

Keratin, type I cytoskeletal 42-like

comp95706_c0

CEACAM2

7.64E-10

2.7041

Up

Carcinoembryonic antigen-related Cell adhesion molecule 2-like, partial

comp90443_c0

HIGD1A

2.68E-09

2.6328

UP

HIG1 domain family, member 1A

comp94262_c0

CD59

3.23E-09

2.5861

Up

CD59 glycoprotein-like

comp75816_c0

TMEM229B

1.41E-08

2.548

Up

Transmembrane protein 229b-like

comp82708_c0

NPPC

3.42E-08

2.7999

Up

C-type natriuretic peptide 2

comp84554_c0

LDHA

3.87E-08

2.6708

Up

Lactate dehydrogenase A

comp20263_c0

N/A

5.16E-08

5.0778

Up

Hypothetical protein M91_20043

  1. The gene ID, FDR, log2 FC, and gene description of the top 10 down-regulated and 10 up-regulated significantly differentially expressed genes (DEGs) are presented. Expression means gene expression level at the breeding period compared with the expression level at the post-breeding period (up- or down-regulated). We sorted the DEGs first by the smallest FDR and then by the largest absolute value of log2 FC. FDR, false discovery rate adjusted P-value. Log2 FC, log2 transformed fold-change values