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Table 5 Loss of coordinated expression of COPS5 with mitochondria related genes in the tumor tissues

From: Analysis of RNA expression of normal and cancer tissues reveals high correlation of COP9 gene expression with respiratory chain complex components

 

GO and KEGG

Found

Expected

p

μ

1

GO:0015935 ~ small ribosomal subunit

28

6

1.11E-16

3.08E-03

2

GO:0033279 ~ ribosomal subunit

50

11

1.11E-16

6.30E-03

3

GO:0003735 ~ structural constituent of ribosome

58

13

1.11E-16

7.94E-03

4

GO:0005840 ~ ribosome

68

16

1.11E-16

1.02E-02

5

hsa03010 ~ ribosome

30

8

1.11E-16

4.42E-03

6

GO:0042254 ~ ribosome biogenesis

36

10

1.11E-16

6.10E-03

7

GO:0006414 ~ translational elongation

32

9

1.11E-16

5.06E-03

8

GO:0006412 ~ translation

79

23

1.11E-16

1.60E-02

9

GO:0022613 ~ ribonucleoprotein complex biogenesis

47

14

1.11E-16

9.03E-03

10

GO:0030529 ~ ribonucleoprotein complex

112

34

1.11E-16

2.54E-02

11

GO:0044445 ~ cytosolic part

39

12

1.11E-16

7.49E-03

12

GO:0005739 ~ mitochondrion

154

65

1.11E-16

5.33E-02

13

GO:0044429 ~ mitochondrial part

88

38

1.11E-16

2.90E-02

14

GO:0003723 ~ RNA binding

103

46

1.11E-16

3.61E-02

15

GO:0006396 ~ RNA processing

79

36

1.11E-16

2.75E-02

16

GO:0005730 ~ nucleolus

96

45

1.11E-16

3.47E-02

17

GO:0070013 ~ intracellular organelle lumen

217

104

1.11E-16

8.90E-02

18

GO:0031974 ~ membrane-enclosed lumen

223

108

1.11E-16

9.28E-02

19

GO:0043233 ~ organelle lumen

217

106

1.11E-16

9.10E-02

20

GO:0031981 ~ nuclear lumen

176

86

1.11E-16

7.25E-02

  1. The analysis was carried out in the same way as for Table 5