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Table 1 Strains characteristics and phenotyping results

From: Carbohydrate metabolism in Oenococcus oeni: a genomic insight

Branch(1) Strain(2) Origin Glucose Trehalose Cellobiose Ribose Mannose Meli biose L-Arabinose Fructose Sucrose Maltose Galactose Xylose Raffinose Lactose L-Sorbose L-rhamnose Sorbitol Mannitol Total(3) Genome sequence accession number
A S28a France red wine 1 1 1 1 1   1             6 AZJY00000000
A S23 England white wine 1 1 1 1 1   1             6 AZLL00000000
A S11 France white wine 1 1 1 1 1 1 1 1            8 AZJX00000000
A AWRI_B429a Italy 1 1 1 1 1               5 ACSE00000000
A Cinea NA 1 1 1 1 1 1              6 AZJV00000000
A IOEB_0608 France red wine 1 1 1 1 1   1             6 AZKJ00000000
A IOEB_9517 France 1 1 1 1 1               5 AZKG00000000
A IOEB_L65.2 Lebanon red wine 1 1 1 1 1               5 AZLR00000000
A AWRI_B419a France 1 1 1 1 1 1 1             7 ALAF00000000
A VFa France 1 1 1 1 1 1 1             7 AZLM00000000
A IOEB_S436a NA 1 1 1 1 1 1 1             7 AZLS00000000
A S15 France red wine 1 1 1 1 1 1 1     1         8 AZLJ00000000
A S161 red wine 1 1 1 1 1 1 1     1         8 AZLN00000000
A IOEB_S277a France 1 1 1 1 1 1 1             7 AZKD00000000
A IOEB_L18.3 Lebanon red wine 1 1 1 1 1 1              6 AZLO00000000
A IOEB_B10 NA 1 1 1   1 1   1            6 AZJW00000000
A S19 France red wine 1 1 1   1 1   1            6 AZLK00000000
A IOEB_1491 France red wine 1 1 1   1 1   1            6 AZLG00000000
A AWRI_B129 France 1 1 1 1 1 1   1            7 AJTP00000000
A IOEB_L40.4 Lebanon red wine 1 1 1 1 1 1 1 1            8 AZLQ00000000
A IOEB_S450a France 1 1 1 1 1 1              6 AZLT00000000
A PSU-1a USA red wine 1 1 1 1 1 1 1 1            8 CP000411 (18)
A S14 France red wine 1 1 1 1 1 1              6 AZLI00000000
A B16a France Champagne 1 1 1 1                4 AZKC00000000
A IOEB_0205 France Champagne 1 1 1 1                4 AZHH00000000
A AWRI_B548a France Champagne 1 1 1 1                4 ALAH00000000
A IOEB_0607 France red wine 1   1 1   1              4 AZKK00000000
A S25 France red wine 1 1 1    1              4 AZJZ00000000
A IOEB_L26.1 Lebanon red wine 1 1 1 1 1 1       1        7 AZLP00000000
B S13 France red wine 1 1   1 1 1 1 1            7 AZKB00000000
B S12 France white wine 1 1   1 1 1 1 1 1 1          9 AZLH00000000
B IOEB_0501 France red wine 1 1 1 1 1 1 1 1 1 1 1   1       12 AZIP00000000
B IOEB_0502 France red wine 1 1 1 1 1 1 1 1 1 1   1 1       12 AZKL00000000
B ATCC_BAA-1163 France red wine 1 1 1 1 1 1   1 1           8 AAUV00000000
B IOEB_9803 France 1 1 1 1 1 1 1 1 1 1          10 AZKF00000000
B IOEB_9805 France 1 1 1 1 1 1 1 1 1 1          10 AZKE00000000
B IOEB_8417 France 1 1 1 1 1 1 1 1 1           9 AZKH00000000
B IOEB_9304 France cider 1 1 1 1 1 1 1 1   1          9 AZKI00000000
B IOEB_C28 France cider 1 1 1 1 1 1 1 1    1         9 AZLE00000000
B IOEB_C23 France cider 1 1 1 1 1 1 1 1 1 1          10 AZJU00000000
C IOEB_C52 France cider 1 1 1 1 1 1 1 1 1 1   1        11 AZLF00000000
   total/41 41 40 39 37 36 32 23 19 9 8 4 3 2 0 0 0 0 0   
   Total (%) 100% 98% 95% 90% 88% 78% 56% 46% 22% 20% 10% 7% 5% 0% 0% 0% 0% 0%   
  1. (1) The strains are listed according to their phylogenomic proximity and the branch in the dendrogram to which they belong is indicated (see Additional file 2: Figure S2)
  2. (2) The strains proposed and or commercialized as malolactic starters are indicated bya
  3. (3) The sugars are classified by order of preference. When a sugar is metabolized by a strain, the number 1 appears in the cell of the table. The number of sugars metabolized by each strain is indicated