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Table 2 Consensus homopolymeric tracts in genomes of the four sequenced C jejuni isolates

From: Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population

Homolog in NCTC11168

Length of homopolymeric tract

00–2425

00–2426

00–2538

00–2544

115 bp upstream of L-asparaginase start codon (Cj0029)

10 C

10 C

10 C

10 C

Cj0045c iron-binding protein

10 C

10 C

10 C

10 C

Cj0170 methyltransferase

8 C

10 C

9 C

10 C

Between Cj0564 and Cj0565

10 G

11 G

11 G

10 G

Cj0617 carbonic anhydrase

9 G

10 G

10 G

9 G

Cj0628 lipoprotein

9 G

9 G

9 G

9 G

Cj0676 kdpA potassium-transporting ATPase A subunit

10 G

9 G

10 G

8 G

Cj0685c invasion protein CipA

9 G

8 G

9 G

9 G

Between Cj0742 (membrane protein) and 16S rRNA locus

10 C

10 C

10 C

10 C

Cj1051c cjeI restriction modification enzyme

9 C

10 C

9 C

9 C

Cj1139c wlaN β-1,3-galactosyltransferase

8 C

8 C

8 C

9 C

Cj1145 hypothetical protein

8 C

10 C

9 C

9 C

Cj1295 aminopeptidase

9 G

9 G

8 G

10 G

Cj1296 AAC(3) family N-acetyltransferase

9 G

9 G

9 G

9 G

Cj1305c carbonic anhydrase

10 C

9 C

10 C

11 C

Cj1306c carbonic anhydrase

9 C

9 C

9 C

9 C

Cj1310 hypothetical protein

9 C

9 C

9 C

10 C

Cj1321 promoter region; 37 bp upstream of Cj1321 start

10 G

10 G

11 G

11 G

Cj1325 methyltransferase

10 G

10 G

11 G

10 G

Cj1335–1336 motility accessory factor, maf4

9 G

10 G

9 G

9 G

Cj1342 motility accessory factor, maf7

8 C

9 C

9 C

9 C

Cj1420c methyltransferase

10 C

10 C

10 C

10 C

Cj1421c sugar transferase

9 C

9 C

9 C

9 C

Cj1422 sugar transferase

9 C

9 C

9 C

9 C

Cj1426c methyltransferase

11 C

12 C

9 C

11 C

Cj1429 hypothetical protein

11 C

8 C

10 C

11 C

Cj1437 hypothetical protein

9 C

9 C

9 C

10 C

  1. Homopolymeric tract lengths corresponding to expression of the full length protein are in bold font