TRPM2 SNP genotype previously associated with susceptibility to Rhodococcus equi pneumonia in Quarter Horse foals displays differential gene expression identified using RNA-Seq

Table 2 Transcriptome-wide differentially expressed genes identified by edgeR analysis

Ensembl ID	Gene name	Log FC^a	Log CPM^b	P value	FDR
ENSECAG00000022239	ANKRD22	−5.82	0.23	0.0000	0.0000
ENSECAG00000006492	DQB	−2.00	7.30	0.0000	0.0028
ENSECAG00000006662	MPO	−3.22	−0.44	0.0000	0.0483
ENSECAG00000017147	C15orf52	−3.08	−1.66	0.0000	0.0968
ENSECAG00000002249	PLEKHG4B	−4.64	−1.57	0.0000	0.0983
ENSECAG00000008171	N/A	−3.80	−0.68	0.0000	0.1476
ENSECAG00000008238	S100A5	−3.41	−1.98	0.0001	0.1476
ENSECAG00000016666	OMG	0.89	6.37	0.0001	0.2650
ENSECAG00000006656	N/A	−3.08	−2.89	0.0002	0.4258
ENSECAG00000024043	CSTA	−2.09	2.50	0.0003	0.4904

ISSN: 1471-2164