Fig. 1
Genome features and comparisons of M120 and CD105HS27. Comparison between M120 reference genome (top), M120 sequenced with SMRT (middle) and CD105HS27 (below). The genomes are connected by regions indicating nucleotide (nt) sequence similarity with notable genomic features annotated at locations along the genome including the PaLoc (Pathogenicity Locus), C. difficile binary toxin (CDT) genes, C. difficile sigK intervening (skinCd) element, flagella gene region 1 (F1) and annotated transposons. The GC% is provided for all three genomes alongside the coverage and methylation modifications for N4-methylcytosine (m4C), N6-methyladenine (m6A) and undetermined modified bases. Boxes highlight the different methylation patterns observed across each of the unique transposons