Table 2 Transcriptome statistics
| Â | ALL | TWO |
|---|---|---|
Number of reads used for assembly | 64′864′842 | 42′590′534 |
Number of contigs (Putative transcript isoforms) | 71′182 | 63′062 |
Number of isotigs (Putative identified genes) | 45′629 | 42′610 |
N50 (bp) | 1′891 | 1′746 |
Maximum length | 20′032 | 15′025 |
Minimum length | 224 | 224 |
% of reads mapped to the transcriptome | 81.7 | 82.0 |
% of uniquely mapping reads | 58.2 | 61.5 |
Average ortholog hit ratio | 0.57 | 0.55 |
Total Blastx hits against A. pisum proteome | 24′936 (35.0%) | 23′173 (36.7%) |