Table 8 Results of FunCat enrichment analysis for the orthologous gene clusters including P. subalpina that were mainly restricted to pathogenic and saprophytic species
FunCat IDa | Description | Pathogen-related proteins | Saprophyte-related proteins | Total proteins in QuartetS clusters | Total proteins in Ps genome |
|---|---|---|---|---|---|
01.05 | C-compound and carbohydrate metabolism | 12 | 6 | 18 | 2473 |
01.20 | secondary metabolism | 9 | 7 | 16 | 2652 |
01.06 | lipid, fatty acid and isoprenoid metabolism | 7 | 4 | 11 | 1387 |
20.03 | transport facilities | 7 | 3 | 10 | 1216 |
11.02.03.04 | transcriptional control | 7 | 2 | 9 | 923 |
20.01.03 | C-compound and carbohydrate transport | 5 | 4 | 9 | 504 |
16.01 | protein binding | 6 | 2 | 8 | 1904 |
16.03.01 | DNA binding | 6 | 2 | 8 | 577 |
20.09.18.07 | non-vesicular cellular import | 5 | 3 | 8 | 428 |
32.05.05 | virulence, disease factors | 5 | - | 5 | 350 |
01.06.06.11 | tetracyclic and pentacyclic triterpenes cholesterin, steroids and hopanoids metabolism | - | 2 | 2 | 173 |